GenomicStudyDataFormatCS

Genomic Study Data Format CodeSystem

activeGenomics Reporting3.0.0complete40 concepts

Backport of http://hl7.org/fhir/genomicstudy-dataformat

Metadata

Canonical URL: http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-data-format-cs
ID: genomic-study-data-format-cs
Version: 3.0.0
Publisher: HL7 International / Clinical Genomics
Case Sensitive: Yes

Code	Display	Definition
`bam`	BAM	-
`bed`	BED	-
`bedpe`	BEDPE	-
`bedgraph`	BedGraph	-
`bigbed`	bigBed	-
`bigWig`	bigWig	-
`birdsuite-files`	Birdsuite-Files	-
`broadpeak`	broadPeak	-
`cbs`	CBS	-
`chemical-reactivity-probing-profiles`	Chemical-Reactivity-Probing-Profiles	-
`chrom-sizes`	chrom-sizes	-
`cn`	CN	-
`custom-file-formats`	Custom-File-Formats	-
`cytoband`	Cytoband	-
`fasta`	FASTA	-
`gct`	GCT	-
`cram`	CRAM	-
`genepred`	genePred	-
`gff-gtf`	GFF/GTF	-
`gistic`	GISTIC	-
`goby`	Goby	-
`gwas`	GWAS	-
`igv`	IGV	-
`loh`	LOH	-
`maf-multiple-alignment-format`	MAF-Multiple Alignment Format	-
`maf-mutation-annotation-format`	MAF-Mutation-Annotation-Format	-
`merged-bam-file`	Merged BAM File	-
`mut`	MUT	-
`narrowpeak`	narrowPeak	-
`psl`	PSL	-
`res`	RES	-
`rna-secondary-structure-formats`	RNA-Secondary-Structure-Formats	-
`sam`	SAM	-
`sample-info-attributes-file`	Sample-Info-Attributes-file	-
`seg`	SEG	-
`tdf`	TDF	-
`track-line`	Track Line	-
`type-line`	Type Line	-
`vcf`	VCF	-
`wig`	WIG	-