$match

Find Population Structural Subsuming Variants

activeGenomics Reporting3.0.0operation3 inputs1 output

Retrieve count or list of patients having structural subsuming variants in specified regions.

Metadata

hl7.org/fhir
Canonical URL
http://hl7.org/fhir/uv/genomics-reporting/OperationDefinition/find-population-structural-subsuming-variants
Code
$match
Kind
operation
Affects State
No
Publisher
HL7 International / Clinical Genomics

Invocation Context

Can be invoked at:
Type Level

Input Parameters (3)

NameTypeCard.Description
ranges*string1..*List of regions to be searched for variants. Must be in zero-based RefSeq:Integer-range format (e.g. 'NC_000007.14:55174721-55174820').
genomicSourceClassstring0..1Enables an App to limit results to those that are 'germline' or 'somatic'. Default is to include variants irrespective of genomic source class.
includePatientListboolean0..1Include list of matching patients if set to true. Default=false.

Output Parameters (1)

NameTypeCard.Description
variantsany1..*

Additional Information

Version
3.0.0
Date
2024-12-12T20:43:36+00:00