ExtensionSubstanceSourceMaterial_Organism
R5: This subclause describes the organism which the substance is derived from. For vaccines, the parent organism shall be specified based on these subclause elements. As an example, full taxonomy will be described for the Substance Name: ., Leaf (new)
activeExtensions for Using Data Elements from FHIR R5 in FHIR R40.1.01 context
R5: `SubstanceSourceMaterial.organism` (new:BackboneElement)
Metadata
hl7.org/fhir- Canonical URL
- http://hl7.org/fhir/5.0/StructureDefinition/extension-SubstanceSourceMaterial.organism
- ID
- ext-R5-SubstanceSourceMaterial.organism
- Name
- ExtensionSubstanceSourceMaterial_Organism
Context (1)
This extension can be used on the following elements:
element
Basic| Path | Card. | Type | Flags | Description |
|---|---|---|---|---|
| Extension | 0..1 | R5: This subclause describes the organism which the substance is derived from. For vaccines, the parent organism shall be specified based on these subclause elements. As an example, full taxonomy will be described for the Substance Name: ., Leaf (new) | ||
| extension | 0..* | |||
| :family | 0..1 | R5: The family of an organism shall be specified (new) | ||
| url | 1..1 | fixed: family | ||
| value[x] | 0..1 | CodeableConcept | The family of an organism shall be specified | |
| :genus | 0..1 | R5: The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies (new) | ||
| url | 1..1 | fixed: genus | ||
| value[x] | 0..1 | CodeableConcept | The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies | |
| :species | 0..1 | R5: The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies (new) | ||
| url | 1..1 | fixed: species | ||
| value[x] | 0..1 | CodeableConcept | The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies | |
| :intraspecificType | 0..1 | R5: The Intraspecific type of an organism shall be specified (new) | ||
| url | 1..1 | fixed: intraspecificType | ||
| value[x] | 0..1 | CodeableConcept | The Intraspecific type of an organism shall be specified | |
| :intraspecificDescription | 0..1 | R5: The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention (new) | ||
| url | 1..1 | fixed: intraspecificDescription | ||
| value[x] | 0..1 | string | The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention | |
| :author | 0..* | R5: 4.9.13.6.1 Author type (Conditional) (new) | ||
| extension | 0..* | |||
| :authorType | 0..1 | R5: The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name (new) | ||
| url | 1..1 | fixed: authorType | ||
| value[x] | 0..1 | CodeableConcept | The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name | |
| :authorDescription | 0..1 | R5: The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank) (new) | ||
| url | 1..1 | fixed: authorDescription | ||
| value[x] | 0..1 | string | The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank) | |
| url | 1..1 | fixed: author | ||
| value[x] | 0..0 | |||
| :hybrid | 0..1 | R5: 4.9.13.8.1 Hybrid species maternal organism ID (Optional) (new) | ||
| extension | 0..* | |||
| :maternalOrganismId | 0..1 | R5: The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal (new) | ||
| url | 1..1 | fixed: maternalOrganismId | ||
| value[x] | 0..1 | string | The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal | |
| :maternalOrganismName | 0..1 | R5: The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal (new) | ||
| url | 1..1 | fixed: maternalOrganismName | ||
| value[x] | 0..1 | string | The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal | |
| :paternalOrganismId | 0..1 | R5: The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary (new) | ||
| url | 1..1 | fixed: paternalOrganismId | ||
| value[x] | 0..1 | string | The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary | |
| :paternalOrganismName | 0..1 | R5: The name of the paternal species constituting the hybrid organism shall be specified (new) | ||
| url | 1..1 | fixed: paternalOrganismName | ||
| value[x] | 0..1 | string | The name of the paternal species constituting the hybrid organism shall be specified | |
| :hybridType | 0..1 | R5: The hybrid type of an organism shall be specified (new) | ||
| url | 1..1 | fixed: hybridType | ||
| value[x] | 0..1 | CodeableConcept | The hybrid type of an organism shall be specified | |
| url | 1..1 | fixed: hybrid | ||
| value[x] | 0..0 | |||
| :organismGeneral | 0..1 | R5: 4.9.13.7.1 Kingdom (Conditional) (new) | ||
| extension | 0..* | |||
| :kingdom | 0..1 | R5: The kingdom of an organism shall be specified (new) | ||
| url | 1..1 | fixed: kingdom | ||
| value[x] | 0..1 | CodeableConcept | The kingdom of an organism shall be specified | |
| :phylum | 0..1 | R5: The phylum of an organism shall be specified (new) | ||
| url | 1..1 | fixed: phylum | ||
| value[x] | 0..1 | CodeableConcept | The phylum of an organism shall be specified | |
| :class | 0..1 | R5: The class of an organism shall be specified (new) | ||
| url | 1..1 | fixed: class | ||
| value[x] | 0..1 | CodeableConcept | The class of an organism shall be specified | |
| :order | 0..1 | R5: The order of an organism shall be specified, (new) | ||
| url | 1..1 | fixed: order | ||
| value[x] | 0..1 | CodeableConcept | The order of an organism shall be specified, | |
| url | 1..1 | fixed: organismGeneral | ||
| value[x] | 0..0 | |||
| url | 1..1 | fixed: http://hl7.org/fhir/5.0/StructureDefinition/extension-SubstanceSourceMaterial.organism | ||
| value[x] | 0..0 |